Nothing beats the smell of freshly baked apple cinnamon muffins! These no-fuss, real fruit-added Apple Muffins come together in just minutes to create a warm, comforting addition to breakfast or snacks you can enjoy all week. Great for toddlers, kids, and adults alike!

Teal blue plate with a stack of apple muffins and a side of sliced muffins sitting on a blue napkin on a white counter.
5 stars (4 ratings)
“Delicious muffins! My 1 yr old loves these!” -Karina
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Homemade Apple Muffins

It’s no secret I love a good muffin recipe. I’ve racked up quite a variety, from my banana muffins, to spinach muffins, to yogurt muffins, all the way to these mini blueberry avocado muffins. And now, let’s add a classic – these healthy, homemade apple muffins.

They’ve got real apple flavor, two ways – from both grated apples and unsweetened applesauce. They’re spiced with cinnamon and vanilla. And they’ve got just the right amount of sweetness to make you feel like you’re enjoying a light little treat, but not so much sweetness that you’ll be dreading a sugar crash hours later.

Toddlers, kids and adults will all love these cozy apple muffins. I love to pair these muffins along with a side of Greek yogurt and fresh fruit for breakfast as they do with a schmear of peanut butter for a lovely pick-me-up afternoon snack.

Apple Muffin Video

Ingredients in a spread with graphics with what they are labeled on top.

Ingredients

Make sure to read the recipe card below for full ingredients and instructions!

  • Flour: you can use all-purpose, white whole wheat flour, a mixture of 50/50 white and whole wheat flour, or gluten-free one-for-one flour. 
  • Apple: chopped or grated
  • Maple Syrup: a good quality maple syrup to bring out the natural sweetness of apples. You can also use honey (for babies 1 year and up) or agave nectar.
  • Oil/Butter: to make the muffins nice and moist. You can use coconut, avocado, vegetable, olive oil, or melted butter.
  • Applesauce: plain unsweetened applesauce – homemade or store-bought
  • Eggs
  • Vanilla Extract
  • Cinnamon
  • Baking Soda
  • Salt

You can also find more recipes and information in my best-selling cookbook, Little Foodies: Recipes for Babies and Toddlers with Taste.

Let’s Get Baking

Paper towel on a white counter with shredded apple on top.
Grate the apple, and press out any moisture.
Clear glass baking bowl with wet ingredients inside sitting on a white counter.
Whisk all of the wet ingredients.
Clear glass bowl on a white counter, with muffin batter.
Add in the dry ingredients and gently mix until just combined.
Clear white bowl on a white counter with apple muffin batter.
Add in the grated apples and gently combined.
Blue muffin tin on a white countertop with apple muffins inside.
Spoon into a muffin mold.
Blue muffin tin with cooked apple muffins.
Bake until golden brown.

Muffins for Toddlers & Kids

These apple muffins are great served as is, or with a smear of cream cheese, butter or peanut butter for breakfast. My kids’ current favorite is to serve them with a hard-boiled egg or a cheese stick for a little extra protein for snacks or packed into a school lunch.

Teal blue plate with a cut up muffin, side pink bowl full of yogurt and sliced apples showing how to serve apple muffins to toddlers and kids.

Expert Tips

  • Do No Overmix: I can’t stress this point enough – do not over mix the muffin batter, if you do they won’t rise in the oven and will become dense and hard. The dry ingredients should be just combined with the wet ingredients.
  • Dice, don’t slice: Dicing or even grating the apples into smaller pieces helps distribute them evenly throughout the batter. This ensures a more consistent texture in the muffin and can help with any kiddos who might be a little pickier about what’s in their muffins.
Teal kids plate with a stack of apple muffins and a hand reaching out to pick one up.

Get the recipe: Kid-Requested Healthy Apple Cinnamon Muffins (25-Minutes)

5 stars (4 ratings)
Nothing beats the smell of freshly baked apple cinnamon muffins! These no-fuss, real fruit-added Apple Muffins come together in just minutes to create a warm, comforting addition to breakfast or snacks you can enjoy all week. Great for toddlers, kids, and adults alike!
Yield: 12 muffins
Prep: 5 minutes
Cook: 18 minutes
Total: 22 minutes
Author: Michele Olivier
Course: Breakfast
Print Recipe Pin Recipe

Ingredients 

  • 1 3/4 cups white wheat flour, or all-purpose, gluten-free blend
  • 1 tsp baking powder
  • 1/2 tsp baking soda
  • 1/2 tsp salt
  • 1 tsp cinnamon
  • 1/4 cup pure maple syrup, honey (babies over 1), or agave nectar
  • 1/4 cup sugar
  • 1/3 cup melted butter, or oil such as olive oil, avocado oil, vegetable oil or coconut oil
  • 1/3 cup applesauce, homemade or store-bought
  • 2 large eggs
  • 1 tsp vanilla extract
  • 1 cup apples finely chopped or grated

Instructions 

  • Prep: Preheat the oven to 375° F. Spray or line a muffin tin. Grate or chop the apples.
  • Whisk: In a large bowl, whisk together the maple syrup, sugar, applesauce, butter, eggs, and vanilla.
  • Stir: Add in the flour, baking powder, baking soda, salt, and cinnamon. Gently stir until just combined.
  • Combine: Add in the grated or chopped apples, and gently fold in. Do not overmix.
  • Fill Muffin Tin: Scoop the batter into the muffin tin 3/4 of the way full.
  • Bake: Place the muffin tin into the oven, and bake for 15-18 minutes or until just golden brown.
  • Eat: Let cool to the touch, serve and enjoy!

Notes

Age: roughly 9 months and up 
Mini or Regular Size: you can make these muffins into mini or regular size muffins, the only difference is the baking time. For mini muffins, bake for 10-12 minutes, for regular muffins bake for 18-20 minutes. 
Storage: store in an air-tight container on the counter or fridge for up to 4 days or in the freezer for up to 2 months. 
Note on Flours: you can use all-purpose, white whole wheat flour, a mixture of 50/50 white and whole wheat flour, or gluten-free one-for-one flour. 
How to Store & Freeze
Once the muffins have cooled completely, store them in an airtight container. They will keep on the counter for up to 4 days and in the fridge for up to a week.
To freeze the muffins, place the muffins into a freezer zip-lock baggie or stasher bag and place in the freezer. They will keep for up to 3 months frozen.
Thaw frozen muffins overnight in the fridge or gently warm them in the microwave.
Kids in the Kitchen
Muffins are a great beginner recipe to help kids build their skills in the kitchen. There are many different ways both toddlers and older kids can help out.

Toddlers

  • Toddlers can help count out the muffin liners and place into the muffin tins.
  • They can help measure and place ingredients into the bowl.
  • Toddlers can help mix the ingredients together.
  • They can help scoop the batter into the muffin tins. (I find it’s easiest to give them their own smaller bowl and spoon to use.)

Kids

  • Older kids can pick out and measure all of the ingredients. 
  • They can help chop or grate the apples with adult supervision.
  • Kids can help mix the ingredients together.
  • They can help pour the batter into the muffin tins.
  • Depending on your child’s age and skill level, they can carefully put the muffin tin into the oven (with adult supervision) and remove once baked. 
 

Equipment

Stackable Glass Bowl Set
Measuring Cups
Silicone Muffin Cups
Bumkins Grip Plate

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Medically reviewed and cowritten by Jamie Johnson, Registered Dietitian Nutritionist (RDN), and Lauren Braaten, Pediatric Occupational Therapist (OT).